ENSMUSG00000018449


Mus musculus

Features
Gene ID: ENSMUSG00000018449
  
Biological name :Rpain
  
Synonyms : Q9CWY9 / Rpain / RPA interacting protein
  
Possible biological names infered from orthology : Q86UA6
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B4
Gene start: 70970213
Gene end: 70977833
  
Corresponding Affymetrix probe sets: 10378013 (MoGene1.0st)   1428828_at (Mouse Genome 430 2.0 Array)   1441814_s_at (Mouse Genome 430 2.0 Array)   1457621_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000137113
Ensembl peptide - ENSMUSP00000018593
Ensembl peptide - ENSMUSP00000104169
Ensembl peptide - ENSMUSP00000127315
Ensembl peptide - ENSMUSP00000128903
Ensembl peptide - ENSMUSP00000133243
Ensembl peptide - ENSMUSP00000136592
NCBI entrez gene - 69723     See in Manteia.
MGI - MGI:1916973
RefSeq - XM_006534122
RefSeq - NM_001252413
RefSeq - NM_001252414
RefSeq - NM_001252415
RefSeq - NM_027186
RefSeq Peptide - NP_001239344
RefSeq Peptide - NP_081462
RefSeq Peptide - NP_001239342
RefSeq Peptide - NP_001239343
swissprot - Q0PL80
swissprot - Q0PL81
swissprot - J3QN46
swissprot - Q9CWY9
swissprot - Q0PL78
swissprot - Q0PL79
swissprot - J3QP63
Ensembl - ENSMUSG00000018449
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpainENSDARG00000063021Danio rerio
 RPAINENSGALG00000001666Gallus gallus
 RPAINENSG00000129197Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028155  RPA-interacting protein, central domain
 IPR028156  RPA-interacting protein
 IPR028158  RPA-interacting protein, N-terminal domain
 IPR028159  RPA-interacting protein, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006261 DNA-dependent DNA replication ISO
 biological_processGO:0006281 DNA repair ISO
 biological_processGO:0006310 DNA recombination ISO
 biological_processGO:0006606 protein import into nucleus ISO
 biological_processGO:0009411 response to UV ISO
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0016605 PML body ISO
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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