ENSDARG00000063036


Danio rerio

Features
Gene ID: ENSDARG00000063036
  
Biological name :psd2
  
Synonyms : pleckstrin and Sec7 domain containing 2 / psd2
  
Possible biological names infered from orthology : PH and SEC7 domain-containing protein 2 / Q6P1I6 / Q9BQI7
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 8127893
Gene end: 8249334
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130218
Ensembl peptide - ENSDARP00000135529
NCBI entrez gene - 557199     See in Manteia.
swissprot - A0A0J9YJB1
swissprot - A0A0R4IAG2
ZFIN ID - ZDB-GENE-030131-3033
Ensembl - ENSDARG00000063036
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PSD2ENSGALG00000030836Gallus gallus
 PSD2ENSG00000146005Homo sapiens
 Psd2ENSMUSG00000024347Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
psd3l / pleckstrin and Sec7 domain containing 3, likeENSDARG0000010482043
si:ch211-150i13.1 / PSD* / Q5DTT2* / A5PKW4* / pleckstrin and Sec7 domain containing* / Mus musculus pleckstrin and Sec7 domain containing (Psd), transcript variant 2, mRNA.*ENSDARG0000007810235
CABZ01068356.1 / PSD* / A5PKW4* / pleckstrin and Sec7 domain containing*ENSDARG0000007670218
gbf1 / golgi brefeldin A resistant guanine nucleotide exchange factor 1 / Q92538*ENSDARG0000002701617


Protein motifs (from Interpro)
Interpro ID Name
 IPR000904  Sec7 domain
 IPR001605  Pleckstrin homology domain, spectrin-type
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR023394  Sec7, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IMP
 biological_processGO:0008345 larval locomotory behavior IMP
 biological_processGO:0032012 regulation of ARF protein signal transduction IEA
 biological_processGO:0061053 somite development IMP
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005086 ARF guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0005543 phospholipid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain edematous , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000075 spinal cord spinal cord decreased thickness , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000114 heart heart morphology , abnormal
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 ZFA:0000155 somite somite morphology , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk curved ventral , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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