ENSDARG00000104820


Danio rerio

Features
Gene ID: ENSDARG00000104820
  
Biological name :psd3l
  
Synonyms : pleckstrin and Sec7 domain containing 3, like / psd3l
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 7029664
Gene end: 7233955
  
Corresponding Affymetrix probe sets: Dr.22807.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000142332
Ensembl peptide - ENSDARP00000156953
Ensembl peptide - ENSDARP00000154205
Ensembl peptide - ENSDARP00000130428
NCBI entrez gene - 559329     See in Manteia.
RefSeq - XM_021479247
swissprot - E7FAY0
swissprot - A0A140LGF3
ZFIN ID - ZDB-GENE-030131-8195
Ensembl - ENSDARG00000104820
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
psd2 / pleckstrin and Sec7 domain containing 2 / Q6P1I6* / Q9BQI7* / PH and SEC7 domain-containing protein 2 *ENSDARG0000006303638
si:ch211-150i13.1 / PSD* / Q5DTT2* / A5PKW4* / pleckstrin and Sec7 domain containing* / Mus musculus pleckstrin and Sec7 domain containing (Psd), transcript variant 2, mRNA.*ENSDARG0000007810231
CABZ01068356.1 / PSD* / A5PKW4* / pleckstrin and Sec7 domain containing*ENSDARG0000007670216
gbf1 / golgi brefeldin A resistant guanine nucleotide exchange factor 1 / Q92538*ENSDARG0000002701615


Protein motifs (from Interpro)
Interpro ID Name
 IPR000904  Sec7 domain
 IPR001605  Pleckstrin homology domain, spectrin-type
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR023394  Sec7, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032012 regulation of ARF protein signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005086 ARF guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr