ENSDARG00000078102


Danio rerio

Features
Gene ID: ENSDARG00000078102
  
Biological name :si:ch211-150i13.1
  
Synonyms : si:ch211-150i13.1
  
Possible biological names infered from orthology : A5PKW4 / Mus musculus pleckstrin and Sec7 domain containing (Psd), transcript variant 2, mRNA. / pleckstrin and Sec7 domain containing / PSD / Q5DTT2
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 22740038
Gene end: 22774491
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000149269
Ensembl peptide - ENSDARP00000098718
Ensembl peptide - ENSDARP00000123331
NCBI entrez gene - 570918     See in Manteia.
swissprot - F1QCL5
swissprot - F1QIG0
ZFIN ID - ZDB-GENE-090313-44
Ensembl - ENSDARG00000078102
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PSDENSGALG00000042551Gallus gallus
 PSDENSG00000059915Homo sapiens
 PsdENSMUSG00000037126Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
psd2 / pleckstrin and Sec7 domain containing 2 / Q6P1I6* / Q9BQI7* / PH and SEC7 domain-containing protein 2 *ENSDARG0000006303655
psd3l / pleckstrin and Sec7 domain containing 3, likeENSDARG0000010482055
CABZ01068356.1 / PSD* / A5PKW4* / pleckstrin and Sec7 domain containing*ENSDARG0000007670238
gbf1 / golgi brefeldin A resistant guanine nucleotide exchange factor 1 / Q92538*ENSDARG0000002701623


Protein motifs (from Interpro)
Interpro ID Name
 IPR000904  Sec7 domain
 IPR001605  Pleckstrin homology domain, spectrin-type
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR023394  Sec7, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032012 regulation of ARF protein signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005086 ARF guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0005543 phospholipid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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