ENSDARG00000063129


Danio rerio

Features
Gene ID: ENSDARG00000063129
  
Biological name :si:ch211-38m6.7
  
Synonyms : si:ch211-38m6.7
  
Possible biological names infered from orthology : KCNMB3 / potassium calcium-activated channel subfamily M regulatory beta subunit 3 / Q9NPA1
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 7831914
Gene end: 7845110
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000086420
Ensembl peptide - ENSDARP00000138229
NCBI entrez gene - 101885585     See in Manteia.
RefSeq - XM_009297606
swissprot - E7EY50
swissprot - A0A0R4IRB9
ZFIN ID - ZDB-GENE-130603-15
Ensembl - ENSDARG00000063129
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCNMB3ENSG00000171121Homo sapiens
 Kcnmb3ENSMUSG00000091091Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kcnmb2 / potassium large conductance calcium-activated channel, subfamily M, beta member 2 / Q16558* / KCNMB1* / Q9Y691* / Q9CZM9* / AC117457.1* / Calcium-activated potassium channel subuni...ENSDARG0000000656824
si:ch211-247n2.1 / KCNMB2* / Q9Y691* / Q9CZM9* / KCNMB1* / Q16558* / AC117457.1* / Calcium-activated potassium channel subunit beta-2 * / potassium calcium-activated channel subfamily M reg...ENSDARG0000000171224


Protein motifs (from Interpro)
Interpro ID Name
 IPR003930  Potassium channel, calcium-activated, BK, beta subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005513 detection of calcium ion IBA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015269 calcium-activated potassium channel activity IEA
 molecular_functionGO:0015459 potassium channel regulator activity IBA


Pathways (from Reactome)
Pathway description
Ca2+ activated K+ channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000001712 si:ch211-247n2.1 / KCNMB2* / Q9Y691* / Q9CZM9* / KCNMB1* / Q16558* / AC117457.1* / Calcium-activated potassium channel subunit beta-2 * / potassium calcium-activated channel subfamily M reg...  / complex
 ENSDARG00000063129 si:ch211-38m6.7 / KCNMB3* / Q9NPA1* / potassium calcium-activated channel subfamily M regulatory beta subunit 3*  / complex
 ENSDARG00000079840 kcnma1a / potassium large conductance calcium-activated channel, subfamily M, alpha member 1a / KCNMA1* / Q12791* / potassium calcium-activated channel subfamily M alpha 1* / potassium larg...  / complex






 

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