ENSDARG00000063229


Danio rerio

Features
Gene ID: ENSDARG00000063229
  
Biological name :xpo1b
  
Synonyms : exportin 1 (CRM1 homolog, yeast) b / xpo1b
  
Possible biological names infered from orthology : exportin 1 / O14980 / Q6P5F9 / XPO1
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 23964132
Gene end: 23988404
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129052
Ensembl peptide - ENSDARP00000128611
Ensembl peptide - ENSDARP00000149441
NCBI entrez gene - 561138     See in Manteia.
swissprot - E7FBU7
swissprot - X1WFP8
ZFIN ID - ZDB-GENE-070530-6
Ensembl - ENSDARG00000063229
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 XPO1ENSGALG00000029476Gallus gallus
 XPO1ENSG00000082898Homo sapiens
 Xpo1ENSMUSG00000020290Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xpo1a / exportin 1 (CRM1 homolog, yeast) aENSDARG0000007804194


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR013598  Exportin-1/Importin-beta-like
 IPR014877  CRM1 C-terminal domain
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IBA
 biological_processGO:0000056 ribosomal small subunit export from nucleus IBA
 biological_processGO:0001878 response to yeast IDA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0046825 regulation of protein export from nucleus IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005049 nuclear export signal receptor activity IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
Deactivation of the beta-catenin transactivating complex
HuR (ELAVL1) binds and stabilizes mRNA
RHO GTPases Activate Formins
MAPK6/MAPK4 signaling
Cyclin A/B1/B2 associated events during G2/M transition


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000014571 ctnnb1 / catenin (cadherin-associated protein), beta 1 / P35222* / catenin beta 1*  / complex






 

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