ENSDARG00000063297


Danio rerio

Features
Gene ID: ENSDARG00000063297
  
Biological name :abcb6a
  
Synonyms : abcb6a / ATP-binding cassette, sub-family B (MDR/TAP), member 6a
  
Possible biological names infered from orthology : ABCB6 / ATP-binding cassette, sub-family B (MDR/TAP), member 6 / ATP binding cassette subfamily B member 6 (Langereis blood group) / Q9DC29 / Q9NP58
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 6135176
Gene end: 6158609
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000086756
Ensembl peptide - ENSDARP00000155343
NCBI entrez gene - 564067     See in Manteia.
RefSeq - NM_001145693
RefSeq Peptide - NP_001139165
swissprot - F1QCK2
ZFIN ID - ZDB-GENE-050517-9
Ensembl - ENSDARG00000063297
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCB6ENSGALG00000029672Gallus gallus
 ABCB6ENSG00000115657Homo sapiens
 Abcb6ENSMUSG00000026198Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcb6b / ATP-binding cassette, sub-family B (MDR/TAP), member 6b / ABCB6* / Q9NP58* / Q9DC29* / ATP-binding cassette, sub-family B (MDR/TAP), member 6* / ATP binding cassette subfamily B me...ENSDARG0000007425457
abcb7 / ATP-binding cassette, sub-family B (MDR/TAP), member 7 / O75027* / Q61102* / ATP binding cassette subfamily B member 7*ENSDARG0000006279531


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032410  Mitochondrial ABC-transporter, N-terminal five TM domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0061072 iris morphogenesis IMP
 biological_processGO:0097325 melanocyte proliferation IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
Mitochondrial ABC transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001114 head head melanocyte decreased amount , abnormal
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 ZFA:0001238 iris iris perforate , abnormal
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 ZFA:0001283 pupil pupil morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000063297 abcb6a / ATP-binding cassette, sub-family B (MDR/TAP), member 6a / ABCB6* / Q9NP58* / Q9DC29* / ATP-binding cassette, sub-family B (MDR/TAP), member 6* / ATP binding cassette subfamily B me...  / complex






 

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