ENSG00000115657


Homo sapiens

Features
Gene ID: ENSG00000115657
  
Biological name :ABCB6
  
Synonyms : ABCB6 / ATP binding cassette subfamily B member 6 (Langereis blood group) / Q9NP58
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q35
Gene start: 219209766
Gene end: 219219017
  
Corresponding Affymetrix probe sets: 203191_at (Human Genome U133 Plus 2.0 Array)   203192_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000392988
Ensembl peptide - ENSP00000404006
Ensembl peptide - ENSP00000414646
Ensembl peptide - ENSP00000265316
Ensembl peptide - ENSP00000295750
Ensembl peptide - ENSP00000401811
NCBI entrez gene - 10058     See in Manteia.
OMIM - 605452
RefSeq - NM_001349828
RefSeq - NM_005689
RefSeq Peptide - NP_001336757
RefSeq Peptide - NP_005680
swissprot - Q9NP58
swissprot - H7BXK9
swissprot - H7C049
swissprot - H7C1R6
swissprot - H7C245
swissprot - H7C3Z0
Ensembl - ENSG00000115657
  
Related genetic diseases (OMIM): 111600 - [Blood group, Langereis system], 111600
  609153 - Pseudohyperkalemia, familial, 2, due to red cell leak, 609153
  614497 - Microphthalmia, isolated, with coloboma 7, 614497
  615402 - Dyschromatosis universalis hereditaria 3, 615402
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcb6aENSDARG00000063297Danio rerio
 abcb6bENSDARG00000074254Danio rerio
 ABCB6ENSGALG00000029672Gallus gallus
 Abcb6ENSMUSG00000026198Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCB7 / O75027 / ATP binding cassette subfamily B member 7ENSG0000013126931


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032410  Mitochondrial ABC-transporter, N-terminal five TM domain
 IPR036640  ABC transporter type 1, transmembrane domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006779 porphyrin-containing compound biosynthetic process IDA
 biological_processGO:0006879 cellular iron ion homeostasis NAS
 biological_processGO:0007420 brain development IMP
 biological_processGO:0015886 heme transport IMP
 biological_processGO:0043588 skin development IMP
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005740 mitochondrial envelope IDA
 cellular_componentGO:0005741 mitochondrial outer membrane TAS
 cellular_componentGO:0005768 endosome ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031307 integral component of mitochondrial outer membrane IDA
 cellular_componentGO:0043190 ATP-binding cassette (ABC) transporter complex NAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015232 heme transporter activity TAS
 molecular_functionGO:0015439 heme-transporting ATPase activity IMP
 molecular_functionGO:0015562 efflux transmembrane transporter activity IDA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0020037 heme binding IDA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
Mitochondrial ABC transporters
Defective ABCB6 causes isolated colobomatous microphthalmia 7 (MCOPCB7)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000589 Coloboma "A developmental defect characterized by a cleft of some portion of the `eye` (FMA:54448`) or ocular adnexa." [HPO:probinson]
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001034 Hyperpigmented macules 
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 HP:0001480 Freckling 
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 HP:0001923 Reticulocytosis 
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 HP:0002153 Hyperkalemia 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004446 Stomatocytosis 
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 HP:0004802 episodic hemolytic anemia 
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 HP:0005518 Erythrocyte macrocytosis 
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 HP:0005590 Spotty hypopigmentation 
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 HP:0007565 Multiple cafe-au-lait spots 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000115657 ABCB6 / Q9NP58 / ATP binding cassette subfamily B member 6 (Langereis blood group)  / complex






 

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