ENSDARG00000063596


Danio rerio

Features
Gene ID: ENSDARG00000063596
  
Biological name :bud23
  
Synonyms : bud23 / BUD23, rRNA methyltransferase and ribosome maturation factor
  
Possible biological names infered from orthology : O43709 / Probable 18S rRNA (guanine-N(7))-methyltransferase / Q9CY21
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 1749843
Gene end: 1765137
  
Corresponding Affymetrix probe sets: Dr.15771.1.S1_at (Zebrafish Array)   NM_001082879_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000087506
Ensembl peptide - ENSDARP00000124121
NCBI entrez gene - 572367     See in Manteia.
RefSeq - NM_001082879
RefSeq Peptide - NP_001076348
swissprot - F8W4V8
swissprot - A3KNP4
ZFIN ID - ZDB-GENE-070410-68
Ensembl - ENSDARG00000063596
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WBSCR22ENSGALG00000037510Gallus gallus
 BUD23ENSG00000071462Homo sapiens
 Bud23ENSMUSG00000005378Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013216  Methyltransferase type 11
 IPR022238  18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0070476 rRNA (guanine-N7)-methylation IBA
 cellular_componentGO:0005730 nucleolus IBA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016435 rRNA (guanine) methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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