ENSG00000071462


Homo sapiens

Features
Gene ID: ENSG00000071462
  
Biological name :BUD23
  
Synonyms : BUD23 / BUD23, rRNA methyltransferase and ribosome maturation factor / O43709
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q11.23
Gene start: 73683025
Gene end: 73705161
  
Corresponding Affymetrix probe sets: 207628_s_at (Human Genome U133 Plus 2.0 Array)   231415_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000401191
Ensembl peptide - ENSP00000398732
Ensembl peptide - ENSP00000404981
Ensembl peptide - ENSP00000415387
Ensembl peptide - ENSP00000265758
Ensembl peptide - ENSP00000390048
Ensembl peptide - ENSP00000390136
Ensembl peptide - ENSP00000391410
Ensembl peptide - ENSP00000391761
Ensembl peptide - ENSP00000392039
Ensembl peptide - ENSP00000394852
Ensembl peptide - ENSP00000398314
NCBI entrez gene - 114049     See in Manteia.
OMIM - 615733
RefSeq - XM_011515779
RefSeq - NM_001202560
RefSeq - NM_017528
RefSeq - XM_006715847
RefSeq - XM_011515778
RefSeq Peptide - NP_001189489
RefSeq Peptide - NP_059998
swissprot - H7C0G4
swissprot - H7C170
swissprot - H7C439
swissprot - O43709
swissprot - B3KR83
swissprot - E9PCQ7
swissprot - F2Z3D9
swissprot - F8VZ18
swissprot - F8WD67
swissprot - F8W1Y1
swissprot - F8WD87
Ensembl - ENSG00000071462
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bud23ENSDARG00000063596Danio rerio
 WBSCR22ENSGALG00000037510Gallus gallus
 Bud23ENSMUSG00000005378Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013216  Methyltransferase type 11
 IPR022238  18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0031167 rRNA methylation TAS
 biological_processGO:0032259 methylation IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0070476 rRNA (guanine-N7)-methylation IEA
 biological_processGO:2000234 positive regulation of rRNA processing IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0008168 methyltransferase activity NAS
 molecular_functionGO:0016435 rRNA (guanine) methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IDA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000173113 Q9UI30 / TRMT112 / tRNA methyltransferase subunit 11-2  / complex






 

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