ENSGALG00000037510


Gallus gallus

Features
Gene ID: ENSGALG00000037510
  
Biological name :WBSCR22
  
Synonyms : BUD23, rRNA methyltransferase and ribosome maturation factor / WBSCR22
  
Possible biological names infered from orthology : BUD23 / O43709 / Probable 18S rRNA (guanine-N(7))-methyltransferase / Q9CY21
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 85884
Gene end: 90660
  
Corresponding Affymetrix probe sets: Gga.15895.1.S1_at (Chicken Array)   Gga.18096.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053389
NCBI entrez gene - 431053     See in Manteia.
RefSeq - NM_001039332
RefSeq Peptide - NP_001034421
swissprot - Q5ZI10
Ensembl - ENSGALG00000037510
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bud23ENSDARG00000063596Danio rerio
 BUD23ENSG00000071462Homo sapiens
 Bud23ENSMUSG00000005378Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022238  18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0070476 rRNA (guanine-N7)-methylation IBA
 biological_processGO:2000234 positive regulation of rRNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016435 rRNA (guanine) methyltransferase activity IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr