ENSDARG00000063670


Danio rerio

Features
Gene ID: ENSDARG00000063670
  
Biological name :gtf2a1l
  
Synonyms : general transcription factor IIA, 1-like / gtf2a1l
  
Possible biological names infered from orthology : Q8R4I4 / TFIIA-alpha and beta-like factor
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 33878
Gene end: 39254
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000087654
NCBI entrez gene - 767629     See in Manteia.
RefSeq - NM_001076571
RefSeq Peptide - NP_001070039
swissprot - Q08BV4
ZFIN ID - ZDB-GENE-060929-28
Ensembl - ENSDARG00000063670
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF2A1LENSGALG00000026747Gallus gallus
 Q8R4I4ENSMUSG00000024154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gtf2a1 / general transcription factor IIA, 1 / P52655* / Q99PM3* / general transcription factor IIA subunit 1* / Transcription initiation factor IIA subunit 1 Transcription initiation facto...ENSDARG0000001100035


Protein motifs (from Interpro)
Interpro ID Name
 IPR004855  Transcription factor IIA, alpha/beta subunit
 IPR009083  Transcription factor IIA, helical
 IPR009088  Transcription factor IIA, beta-barrel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 cellular_componentGO:0005672 transcription factor TFIIA complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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