ENSMUSG00000024154


Mus musculus

Features
Gene ID: ENSMUSG00000024154
  
Biological name :Gtf2a1l
  
Synonyms : Gtf2a1l / Q8R4I4 / TFIIA-alpha and beta-like factor
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: E4
Gene start: 88668660
Gene end: 88715152
  
Corresponding Affymetrix probe sets: 10447467 (MoGene1.0st)   1418426_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124286
Ensembl peptide - ENSMUSP00000024970
NCBI entrez gene - 71828     See in Manteia.
MGI - MGI:1919078
RefSeq - NM_023630
RefSeq - XM_011246628
RefSeq Peptide - NP_076119
swissprot - E0CYD4
swissprot - Q8R4I4
Ensembl - ENSMUSG00000024154
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf2a1lENSDARG00000063670Danio rerio
 GTF2A1LENSGALG00000026747Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gtf2a1 / Q99PM3 / Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA alpha chain Transcription initiation factor IIA beta chain / P52655* / general transcript...ENSMUSG0000002096228


Protein motifs (from Interpro)
Interpro ID Name
 IPR004855  Transcription factor IIA, alpha/beta subunit
 IPR009083  Transcription factor IIA, helical
 IPR009088  Transcription factor IIA, beta-barrel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0050890 cognition ISO
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005672 transcription factor TFIIA complex IEA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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