ENSDARG00000068143


Danio rerio

Features
Gene ID: ENSDARG00000068143
  
Biological name :slc39a6
  
Synonyms : slc39a6 / solute carrier family 39 (zinc transporter), member 6
  
Possible biological names infered from orthology : Q13433 / Q8C145 / solute carrier family 39 member 6 / Zinc transporter ZIP6
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 42156286
Gene end: 42173984
  
Corresponding Affymetrix probe sets: Dr.16483.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116888
Ensembl peptide - ENSDARP00000089128
NCBI entrez gene - 324303     See in Manteia.
RefSeq - XM_005171365
swissprot - F1QKB6
swissprot - E9QF53
ZFIN ID - ZDB-GENE-030131-3023
Ensembl - ENSDARG00000068143
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC39A6ENSGALG00000013209Gallus gallus
 Q13433ENSG00000141424Homo sapiens
 Q8C145ENSMUSG00000024270Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc39a10 / solute carrier family 39 (zinc transporter), member 10 / Q9ULF5* / Q6P5F6* / Zinc transporter ZIP10 * / solute carrier family 39 member 10*ENSDARG0000000582334
slc39a5 / solute carrier family 39 (zinc transporter), member 5 / Q9D856* / Q6ZMH5* / Zinc transporter ZIP5 * / solute carrier family 39 member 5*ENSDARG0000007952523
slc39a14 / A0A0G2KQY6 / solute carrier family 39 (zinc transporter), member 14 / Q15043* / solute carrier family 39 member 14*ENSDARG0000010238720
LO018202.1 / Q9C0K1* / SLC39A8* / solute carrier family 39 member 8*ENSDARG0000011354716
slc39a7 / solute carrier family 39 (zinc transporter), member 7 / Q31125* / Q92504* / solute carrier family 39 member 7*ENSDARG0000010445114
slc39a8 / solute carrier family 39 (zinc transporter), member 8 / Q9C0K1* / Q91W10* / Zinc transporter ZIP8 * / solute carrier family 39 member 8*ENSDARG0000005675712
slc39a13 / solute carrier family 39 (zinc transporter), member 13 / Q96H72* / Q8BZH0* / solute carrier family 39 member 13* / solute carrier family 39 (metal ion transporter), member 13*ENSDARG0000000044211
slc39a4 / solute carrier family 39 (zinc transporter), member 4 / Q6P5W5* / solute carrier family 39 member 4*ENSDARG0000005936111


Protein motifs (from Interpro)
Interpro ID Name
 IPR003689  Zinc/iron permease


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001837 epithelial to mesenchymal transition IMP
 biological_processGO:0006829 zinc ion transport NAS
 biological_processGO:0006882 cellular zinc ion homeostasis IBA
 biological_processGO:0030001 metal ion transport IEA
 biological_processGO:0042074 cell migration involved in gastrulation IMP
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071577 zinc ion transmembrane transport IEA
 biological_processGO:0071578 zinc ion import across plasma membrane IBA
 cellular_componentGO:0005887 integral component of plasma membrane NAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity NAS
 molecular_functionGO:0046873 metal ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Zinc influx into cells by the SLC39 gene family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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