ENSG00000141424


Homo sapiens

Features
Gene ID: ENSG00000141424
  
Biological name :SLC39A6
  
Synonyms : Q13433 / SLC39A6 / solute carrier family 39 member 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q12.2
Gene start: 36108532
Gene end: 36129385
  
Corresponding Affymetrix probe sets: 1555460_a_at (Human Genome U133 Plus 2.0 Array)   1556551_s_at (Human Genome U133 Plus 2.0 Array)   202088_at (Human Genome U133 Plus 2.0 Array)   202089_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000269187
Ensembl peptide - ENSP00000401139
Ensembl peptide - ENSP00000465915
Ensembl peptide - ENSP00000467724
NCBI entrez gene - 25800     See in Manteia.
OMIM - 608731
RefSeq - XM_011525901
RefSeq - NM_001099406
RefSeq - NM_012319
RefSeq - XM_011525900
RefSeq Peptide - NP_036451
RefSeq Peptide - NP_001092876
swissprot - Q13433
swissprot - K7EQ91
Ensembl - ENSG00000141424
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc39a6ENSDARG00000068143Danio rerio
 SLC39A6ENSGALG00000013209Gallus gallus
 Q8C145ENSMUSG00000024270Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9ULF5 / SLC39A10 / solute carrier family 39 member 10ENSG0000019695039
Q6ZMH5 / SLC39A5 / solute carrier family 39 member 5ENSG0000013954022
Q6P5W5 / SLC39A4 / solute carrier family 39 member 4ENSG0000014780420
Q15043 / SLC39A14 / solute carrier family 39 member 14ENSG0000010463520
Q9C0K1 / SLC39A8 / solute carrier family 39 member 8ENSG0000013882119
Q504Y0 / SLC39A12 / solute carrier family 39 member 12ENSG0000014848219
Q92504 / SLC39A7 / solute carrier family 39 member 7ENSG0000011247315
Q96H72 / SLC39A13 / solute carrier family 39 member 13ENSG0000016591510


Protein motifs (from Interpro)
Interpro ID Name
 IPR003689  Zinc/iron permease


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006829 zinc ion transport IEA
 biological_processGO:0006882 cellular zinc ion homeostasis IDA
 biological_processGO:0030001 metal ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071577 zinc ion transmembrane transport IMP
 biological_processGO:0071578 zinc ion import across plasma membrane IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0009986 cell surface HDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031258 lamellipodium membrane IDA
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity TAS
 molecular_functionGO:0046873 metal ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Zinc influx into cells by the SLC39 gene family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr