ENSGALG00000013209


Gallus gallus

Features
Gene ID: ENSGALG00000013209
  
Biological name :SLC39A6
  
Synonyms : SLC39A6 / solute carrier family 39 member 6
  
Possible biological names infered from orthology : Q13433 / Q8C145 / Zinc transporter ZIP6
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 88862596
Gene end: 88873438
  
Corresponding Affymetrix probe sets: Gga.19094.1.S1_s_at (Chicken Array)   GgaAffx.24145.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021545
NCBI entrez gene - 420984     See in Manteia.
RefSeq - XM_015282400
RefSeq - XM_419071
swissprot - E1BQJ5
Ensembl - ENSGALG00000013209
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc39a6ENSDARG00000068143Danio rerio
 Q13433ENSG00000141424Homo sapiens
 Q8C145ENSMUSG00000024270Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC39A10 / solute carrier family 39 member 10 / Q6P5F6* / Q9ULF5* / Zinc transporter ZIP10 *ENSGALG0000000777747
SLC39A8 / solute carrier family 39 member 8 / Q91W10* / Q9C0K1* / Zinc transporter ZIP8 *ENSGALG0000001229828
SLC39A12 / solute carrier family 39 member 12 / Q504Y0* / Q5FWH7* / Zinc transporter ZIP12 *ENSGALG0000000860224
Q6ZMH5* / Q9D856* / SLC39A5* / Zinc transporter ZIP5 * / solute carrier family 39 member 5*ENSGALG0000004619718
Q5ZI20 / SLC39A13 / Zinc transporter ZIP13 / Q96H72* / Q8BZH0* / solute carrier family 39 member 13* / solute carrier family 39 (metal ion transporter), member 13*ENSGALG0000000812215


Protein motifs (from Interpro)
Interpro ID Name
 IPR003689  Zinc/iron permease


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006882 cellular zinc ion homeostasis IEA
 biological_processGO:0030001 metal ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071577 zinc ion transmembrane transport IEA
 biological_processGO:0071578 zinc ion import across plasma membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031258 lamellipodium membrane IEA
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity IEA
 molecular_functionGO:0046873 metal ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Zinc influx into cells by the SLC39 gene family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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