ENSDARG00000068289


Danio rerio

Features
Gene ID: ENSDARG00000068289
  
Biological name :eif3k
  
Synonyms : eif3k / eukaryotic translation initiation factor 3, subunit K
  
Possible biological names infered from orthology : Q9DBZ5 / Q9UBQ5
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 47845369
Gene end: 47848544
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000089482
NCBI entrez gene - 550245     See in Manteia.
RefSeq - NM_001017583
RefSeq Peptide - NP_001017583
swissprot - F1QII8
ZFIN ID - ZDB-GENE-050417-45
Ensembl - ENSDARG00000068289
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TGM2ENSGALG00000029343Gallus gallus
 EIF3KENSG00000178982Homo sapiens
 Eif3kENSMUSG00000053565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009374  Eukaryotic translation initiation factor 3 subunit K
 IPR011991  ArsR-like helix-turn-helix domain
 IPR016020  Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
 IPR016024  Armadillo-type fold
 IPR033464  CSN8/PSMD8/EIF3K


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001732 formation of cytoplasmic translation initiation complex IEA
 biological_processGO:0002183 cytoplasmic translational initiation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0006446 regulation of translational initiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IEA
 cellular_componentGO:0016282 eukaryotic 43S preinitiation complex IEA
 cellular_componentGO:0033290 eukaryotic 48S preinitiation complex IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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