ENSGALG00000029343


Gallus gallus

Features
Gene ID: ENSGALG00000029343
  
Biological name :TGM2
  
Synonyms : protein-glutamine gamma-glutamyltransferase 2 / TGM2
  
Possible biological names infered from orthology : EIF3K / eukaryotic translation initiation factor 3 subunit K / Q9DBZ5 / Q9UBQ5
  
Species: Gallus gallus
  
Chr. number: 32
Strand: 1
Band:
Gene start: 4821
Gene end: 7187
  
Corresponding Affymetrix probe sets: Gga.1035.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048054
Ensembl peptide - ENSGALP00000059492
NCBI entrez gene - 396432     See in Manteia.
RefSeq - NM_205448
RefSeq Peptide - NP_990779
swissprot - A0A1L1RL62
swissprot - A0A1D5P5T1
Ensembl - ENSGALG00000029343
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eif3kENSDARG00000068289Danio rerio
 EIF3KENSG00000178982Homo sapiens
 Eif3kENSMUSG00000053565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009374  Eukaryotic translation initiation factor 3 subunit K
 IPR011991  ArsR-like helix-turn-helix domain
 IPR016020  Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
 IPR016024  Armadillo-type fold
 IPR033464  CSN8/PSMD8/EIF3K


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001732 formation of cytoplasmic translation initiation complex IEA
 biological_processGO:0002183 cytoplasmic translational initiation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0006446 regulation of translational initiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IEA
 cellular_componentGO:0016282 eukaryotic 43S preinitiation complex IEA
 cellular_componentGO:0033290 eukaryotic 48S preinitiation complex IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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