ENSDARG00000068640


Danio rerio

Features
Gene ID: ENSDARG00000068640
  
Biological name :rsf1b.1
  
Synonyms : remodeling and spacing factor 1b, tandem duplicate 1 / rsf1b.1
  
Possible biological names infered from orthology : Q96T23 / remodeling and spacing factor 1 / RSF1
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 36613004
Gene end: 36633882
  
Corresponding Affymetrix probe sets: Dr.12706.2.S1_at (Zebrafish Array)   Dr.25393.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071629
Ensembl peptide - ENSDARP00000116788
Ensembl peptide - ENSDARP00000119974
NCBI entrez gene - 327618     See in Manteia.
swissprot - F1Q6Y6
swissprot - F1R0N9
swissprot - F1R7R2
ZFIN ID - ZDB-GENE-030131-5829
Ensembl - ENSDARG00000068640
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RSF1ENSGALG00000039068Gallus gallus
 RSF1ENSG00000048649Homo sapiens
 Rsf1ENSMUSG00000035623Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rsf1b.1 / remodeling and spacing factor 1b, tandem duplicate 1 / RSF1* / Q96T23* / remodeling and spacing factor 1*ENSDARG0000009350320


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR028938  Remodeling and spacing factor 1
 IPR028942  WHIM1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0031213 RSF complex IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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