ENSDARG00000069274


Danio rerio

Features
Gene ID: ENSDARG00000069274
  
Biological name :ighmbp2
  
Synonyms : ighmbp2 / immunoglobulin mu binding protein 2
  
Possible biological names infered from orthology : P38935
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 20516527
Gene end: 20532339
  
Corresponding Affymetrix probe sets: Dr.17083.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000060290
NCBI entrez gene - 556484     See in Manteia.
RefSeq - NM_001044900
RefSeq Peptide - NP_001038365
swissprot - M9MM98
ZFIN ID - ZDB-GENE-050419-258
Ensembl - ENSDARG00000069274
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IGHMBP2ENSGALG00000004328Gallus gallus
 P38935ENSG00000132740Homo sapiens
 Ighmbp2ENSMUSG00000024831Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000058  Zinc finger, AN1-type
 IPR001374  R3H domain
 IPR003593  AAA+ ATPase domain
 IPR004483  Helicase SMUBP-2/Hcs1-like
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR034072  DNA-binding protein SMUBP-2, R3H domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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