ENSG00000132740


Homo sapiens

Features
Gene ID: ENSG00000132740
  
Biological name :IGHMBP2
  
Synonyms : IGHMBP2 / immunoglobulin mu binding protein 2 / P38935
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.3
Gene start: 68903842
Gene end: 68940602
  
Corresponding Affymetrix probe sets: 215980_s_at (Human Genome U133 Plus 2.0 Array)   243746_at (Human Genome U133 Plus 2.0 Array)   31861_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000255078
Ensembl peptide - ENSP00000440465
Ensembl peptide - ENSP00000443343
Ensembl peptide - ENSP00000456366
NCBI entrez gene - 3508     See in Manteia.
OMIM - 600502
RefSeq - XM_017017671
RefSeq - NM_002180
RefSeq - XM_005273974
RefSeq - XM_017017669
RefSeq - XM_017017670
RefSeq Peptide - NP_002171
swissprot - P38935
swissprot - F5H5K3
swissprot - H3BRR1
swissprot - F5GX64
Ensembl - ENSG00000132740
  
Related genetic diseases (OMIM): 604320 - Neuronopathy, distal hereditary motor, type VI, 604320
  616155 - Charcot-Marie-Tooth disease, axonal, type 2S, 616155
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ighmbp2ENSDARG00000069274Danio rerio
 IGHMBP2ENSGALG00000004328Gallus gallus
 Ighmbp2ENSMUSG00000024831Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZGRF1 / Q86YA3 / zinc finger GRF-type containing 1ENSG0000013865811


Protein motifs (from Interpro)
Interpro ID Name
 IPR000058  Zinc finger, AN1-type
 IPR001374  R3H domain
 IPR003593  AAA+ ATPase domain
 IPR004483  Helicase SMUBP-2/Hcs1-like
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR034072  DNA-binding protein SMUBP-2, R3H domain
 IPR035896  AN1-like Zinc finger
 IPR036867  R3H domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication TAS
 biological_processGO:0006281 DNA repair TAS
 biological_processGO:0006310 DNA recombination TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006412 translation NAS
 biological_processGO:0032508 DNA duplex unwinding IEA
 biological_processGO:0051260 protein homooligomerization IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030424 axon ISS
 cellular_componentGO:0030426 growth cone ISS
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003678 DNA helicase activity TAS
 molecular_functionGO:0003697 single-stranded DNA binding TAS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IDA
 molecular_functionGO:0008094 DNA-dependent ATPase activity IDA
 molecular_functionGO:0008134 transcription factor binding IPI
 molecular_functionGO:0008186 RNA-dependent ATPase activity IDA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0032575 ATP-dependent 5"-3" RNA helicase activity IDA
 molecular_functionGO:0043022 ribosome binding IDA
 molecular_functionGO:0043141 ATP-dependent 5"-3" DNA helicase activity IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000762 Decreased nerve conduction velocities 
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 HP:0000764 Axonal degeneration 
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0001265 Hyporeflexia 
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 HP:0001284 Areflexia 
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 HP:0001508 Failure to thrive 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001518 Low birth weight 
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001612 Weak cry 
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 HP:0001622 Premature birth 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0002019 Constipation 
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 HP:0002398 Degeneration of anterior horn cells 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002789 Tachypnea 
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 HP:0002878 Early respiratory failure 
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 HP:0002936 Distal sensory impairment 
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 HP:0003376 Steppage gait "An abnormal gait pattern that arises from weakness of the pretibial and peroneal muscles due to a lower motor neuron lesion. Affected patients have footdrop and are unable to dorsiflex and evert the foot. The leg is lifted high on walking so that the toes clear the ground, and there may be a slapping noise when the foot strikes the ground again." [HPO:curators]
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 HP:0003445 EMG shows neuropathic changes 
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 HP:0003677 Slow progression 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0005348 Inspiratory stridor "Inspiratory stridor is a high pitched sound upon inspiration that is generally related to laryngeal abnormalities." [HPO:curators]
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 HP:0005946 Ventilar dependence with inability to wean 
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 HP:0006597 Diaphragmatic paralysis 
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 HP:0007269 Spinal muscular atrophy "Muscular weakness and atrophy related to loss of the motor neurons of the spinal cord and brainstem." [HPO:curators]
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009109 Denervation of the diaphragm 
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 HP:0009110 Diaphragmatic eventration "A congenital failure of muscular development of part or all of one or both hemidiaphragms, resulting in superior displacement of abdominal viscera and altered lung development." [HPO:curators]
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 HP:0040078 Axonal degeneration 
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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