ENSDARG00000069478


Danio rerio

Features
Gene ID: ENSDARG00000069478
  
Biological name :slc13a3
  
Synonyms : slc13a3 / solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
  
Possible biological names infered from orthology : Q8WWT9 / Q91Y63 / solute carrier family 13 member 3
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 28667021
Gene end: 28695383
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091933
Ensembl peptide - ENSDARP00000151980
NCBI entrez gene - 405838     See in Manteia.
RefSeq - NM_212902
RefSeq Peptide - NP_998067
swissprot - Q6NWY4
ZFIN ID - ZDB-GENE-040426-2486
Ensembl - ENSDARG00000069478
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000004445Gallus gallus
 Q8WWT9ENSG00000158296Homo sapiens
 Q91Y63ENSMUSG00000018459Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc13a5b / solute carrier family 13 (sodium-dependent citrate transporter), member 5b / Q67BT3* / Q86YT5* / SLC13A5* / solute carrier family 13 member 5*ENSDARG0000003999945
slc13a2 / solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 / Q13183* / solute carrier family 13 member 2*ENSDARG0000005385343
slc13a5a / info solute carrier family 13 (sodium-dependent citrate transporter), member 5a / Q86YT5* / Q67BT3* / SLC13A5* / solute carrier family 13 member 5*ENSDARG0000007769141
slc13a1 / solute carrier family 13 member 1 / Q9BZW2* / Q9JHI4*ENSDARG0000004563839
slc13a4 / solute carrier family 13 (sodium/sulfate symporter), member 4 / Q9UKG4* / solute carrier family 13 member 4*ENSDARG0000005905338


Protein motifs (from Interpro)
Interpro ID Name
 IPR001898  Solute carrier family 13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0006835 dicarboxylic acid transport IEA
 biological_processGO:0015746 citrate transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071422 succinate transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0015137 citrate transmembrane transporter activity IBA
 molecular_functionGO:0015141 succinate transmembrane transporter activity IBA
 molecular_functionGO:0017153 sodium:dicarboxylate symporter activity IBA


Pathways (from Reactome)
Pathway description
Sodium-coupled sulphate, di- and tri-carboxylate transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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