ENSG00000158296


Homo sapiens

Features
Gene ID: ENSG00000158296
  
Biological name :SLC13A3
  
Synonyms : Q8WWT9 / SLC13A3 / solute carrier family 13 member 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: q13.12
Gene start: 46557823
Gene end: 46684467
  
Corresponding Affymetrix probe sets: 205243_at (Human Genome U133 Plus 2.0 Array)   205244_s_at (Human Genome U133 Plus 2.0 Array)   230686_s_at (Human Genome U133 Plus 2.0 Array)   230687_at (Human Genome U133 Plus 2.0 Array)   231217_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000397955
Ensembl peptide - ENSP00000415852
Ensembl peptide - ENSP00000420177
Ensembl peptide - ENSP00000419621
Ensembl peptide - ENSP00000417784
Ensembl peptide - ENSP00000279027
Ensembl peptide - ENSP00000290317
Ensembl peptide - ENSP00000361193
Ensembl peptide - ENSP00000394217
Ensembl peptide - ENSP00000395095
NCBI entrez gene - 64849     See in Manteia.
OMIM - 606411
RefSeq - NM_001193339
RefSeq - NM_001193340
RefSeq - NM_001193342
RefSeq - NM_022829
RefSeq - NM_001011554
RefSeq Peptide - NP_001011554
RefSeq Peptide - NP_001180269
RefSeq Peptide - NP_001180271
RefSeq Peptide - NP_073740
RefSeq Peptide - NP_001180268
swissprot - X6RDV4
swissprot - C9J4A3
swissprot - A0A0A0MRQ6
swissprot - H7C0C8
swissprot - Q8WWT9
swissprot - C9J7L4
Ensembl - ENSG00000158296
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc13a3ENSDARG00000069478Danio rerio
 ENSGALG00000004445Gallus gallus
 Q91Y63ENSMUSG00000018459Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86YT5 / SLC13A5 / solute carrier family 13 member 5ENSG0000014148546
Q13183 / SLC13A2 / solute carrier family 13 member 2ENSG0000000721643
Q9BZW2 / SLC13A1 / solute carrier family 13 member 1ENSG0000008180040
Q9UKG4 / SLC13A4 / solute carrier family 13 member 4ENSG0000016470738


Protein motifs (from Interpro)
Interpro ID Name
 IPR001898  Solute carrier family 13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0006835 dicarboxylic acid transport IEA
 biological_processGO:0015746 citrate transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071422 succinate transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0015137 citrate transmembrane transporter activity IBA
 molecular_functionGO:0015141 succinate transmembrane transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA
 molecular_functionGO:0015362 high-affinity sodium:dicarboxylate symporter activity TAS
 molecular_functionGO:0017153 sodium:dicarboxylate symporter activity IBA


Pathways (from Reactome)
Pathway description
Sodium-coupled sulphate, di- and tri-carboxylate transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr