ENSDARG00000069538


Danio rerio

Features
Gene ID: ENSDARG00000069538
  
Biological name :gtf3c4
  
Synonyms : general transcription factor IIIC, polypeptide 4 / gtf3c4
  
Possible biological names infered from orthology : general transcription factor IIIC subunit 4 / Q8BMQ2 / Q9UKN8 / ral transcription factor 3C polypeptide 4
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 17413613
Gene end: 17424657
  
Corresponding Affymetrix probe sets: Dr.10245.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000092069
NCBI entrez gene - 568510     See in Manteia.
RefSeq - XM_021473407
RefSeq - XM_691843
swissprot - F1Q9E5
ZFIN ID - ZDB-GENE-041008-147
Ensembl - ENSDARG00000069538
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF3C4ENSGALG00000031016Gallus gallus
 GTF3C4ENSG00000125484Homo sapiens
 Gtf3c4ENSMUSG00000035666Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR024761  Transcription factor IIIC, 90kDa subunit, N-terminal
 IPR024764  Transcription factor IIIC, putative zinc-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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