ENSMUSG00000035666


Mus musculus

Features
Gene ID: ENSMUSG00000035666
  
Biological name :Gtf3c4
  
Synonyms : Gtf3c4 / Q8BMQ2 / ral transcription factor 3C polypeptide 4
  
Possible biological names infered from orthology : general transcription factor IIIC subunit 4 / Q9UKN8
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: A3
Gene start: 28822299
Gene end: 28840360
  
Corresponding Affymetrix probe sets: 10481320 (MoGene1.0st)   1434320_at (Mouse Genome 430 2.0 Array)   1438692_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000042265
Ensembl peptide - ENSMUSP00000132171
NCBI entrez gene - 269252     See in Manteia.
MGI - MGI:2138937
RefSeq - XM_006498078
RefSeq - NM_001166033
RefSeq - NM_172977
RefSeq Peptide - NP_001159505
RefSeq Peptide - NP_766565
swissprot - Q8BMQ2
swissprot - E9Q2B0
Ensembl - ENSMUSG00000035666
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf3c4ENSDARG00000069538Danio rerio
 GTF3C4ENSGALG00000031016Gallus gallus
 GTF3C4ENSG00000125484Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR024761  Transcription factor IIIC, 90kDa subunit, N-terminal
 IPR024764  Transcription factor IIIC, putative zinc-finger
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016573 histone acetylation IEA
 cellular_componentGO:0000127 transcription factor TFIIIC complex IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004402 histone acetyltransferase activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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