ENSDARG00000070083


Danio rerio

Features
Gene ID: ENSDARG00000070083
  
Biological name :atp5f1b
  
Synonyms : atp5f1b / ATP synthase F1 subunit beta
  
Possible biological names infered from orthology : Atp5b / ATP synthase subunit beta, mitochondrial / P06576 / P56480
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 13207898
Gene end: 13213059
  
Corresponding Affymetrix probe sets: Dr.24685.2.S1_at (Zebrafish Array)   NM_001024429_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000060309
NCBI entrez gene - 554135     See in Manteia.
RefSeq - NM_001024429
RefSeq Peptide - NP_001019600
swissprot - A8WGC6
ZFIN ID - ZDB-GENE-030131-124
Ensembl - ENSDARG00000070083
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP5BENSGALG00000038801Gallus gallus
 P06576ENSG00000110955Homo sapiens
 Atp5bENSMUSG00000025393Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000194  ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
 IPR003593  AAA+ ATPase domain
 IPR004100  ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
 IPR005722  ATP synthase, F1 complex, beta subunit
 IPR020003  ATPase, alpha/beta subunit, nucleotide-binding domain, active site
 IPR024034  ATPase, F1/V1 complex, beta/alpha subunit, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006754 ATP biosynthetic process IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IEA
 biological_processGO:0046034 ATP metabolic process IEA
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 cellular_componentGO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr