ENSDARG00000070864


Danio rerio

Features
Gene ID: ENSDARG00000070864
  
Biological name :bcl6a
  
Synonyms : B-cell CLL/lymphoma 6a (zinc finger protein 51) / bcl6a
  
Possible biological names infered from orthology : B cell CLL/lymphoma 6 / B-cell lymphoma 6 protein homolog / BCL6 / P41182 / P41183
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 28216487
Gene end: 28222592
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000107695
NCBI entrez gene - 393707     See in Manteia.
RefSeq - NM_200734
RefSeq Peptide - NP_957028
swissprot - F1R5N6
ZFIN ID - ZDB-GENE-040426-1696
Ensembl - ENSDARG00000070864
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BCL6ENSGALG00000007357Gallus gallus
 BCL6ENSG00000113916Homo sapiens
 Bcl6ENSMUSG00000022508Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bcl6ab / B-cell CLL/lymphoma 6a, genome duplicate b / BCL6* / P41183* / P41182* / B cell CLL/lymphoma 6* / B-cell lymphoma 6 protein homolog *ENSDARG0000006929540
bcl6b / B-cell CLL/lymphoma 6, member B / O88282* / Q8N143* / B cell CLL/lymphoma 6B* / B-cell CLL/lymphoma 6 member B protein *ENSDARG0000006933531
zbtb44 / zinc finger and BTB domain containing 44 / Q8NCP5* / Q8R0A2*ENSDARG0000006111015
si:ch211-161m3.4ENSDARG0000010337512
si:dkey-77f5.14ENSDARG0000009802711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042092 type 2 immune response IBA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0045595 regulation of cell differentiation IBA
 biological_processGO:0050727 regulation of inflammatory response IBA
 biological_processGO:0060042 retina morphogenesis in camera-type eye IMP
 biological_processGO:1902254 negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator IMP
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000035 lens lens cell apoptotic , abnormal
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 ZFA:0000109 forebrain forebrain retinal pigmented epithelium mislocalized adaxially , abnormal
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 ZFA:0000152 retina retina perforate , abnormal
retina cell apoptotic , abnormal
retina intrinsic apoptotic signaling pathway by p53 class mediator increased occurrence , abnormal
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 ZFA:0001115 trunk trunk curved lateral , abnormal
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 ZFA:0001284 optic fissure optic fissure open , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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