ENSDARG00000073866


Danio rerio

Features
Gene ID: ENSDARG00000073866
  
Biological name :tdp1
  
Synonyms : tdp1 / tyrosyl-DNA phosphodiesterase 1
  
Possible biological names infered from orthology : Q9NUW8
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 16348830
Gene end: 16422654
  
Corresponding Affymetrix probe sets: Dr.17921.1.A1_at (Zebrafish Array)   XM_695082_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124976
NCBI entrez gene - 571485     See in Manteia.
RefSeq - XM_695082
swissprot - F8W5U2
ZFIN ID - ZDB-GENE-090909-1
Ensembl - ENSDARG00000073866
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TDP1ENSGALG00000010669Gallus gallus
 TDP1ENSG00000042088Homo sapiens
 Tdp1ENSMUSG00000021177Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010347  Tyrosyl-DNA phosphodiesterase I
 IPR027415  Tyrosyl-DNA phosphodiesterase, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Nonhomologous End-Joining (NHEJ)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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