ENSDARG00000073870


Danio rerio

Features
Gene ID: ENSDARG00000073870
  
Biological name :gdpd2
  
Synonyms : gdpd2 / glycerophosphodiester phosphodiesterase domain containing 2
  
Possible biological names infered from orthology : Mus musculus glycerophosphodiester phosphodiesterase domain containing 2 (Gdpd2), transcript variant 3, mRNA. / Q9ESM6 / Q9HCC8
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 33219370
Gene end: 33265068
  
Corresponding Affymetrix probe sets: Dr.9014.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000100472
Ensembl peptide - ENSDARP00000149419
Ensembl peptide - ENSDARP00000113225
NCBI entrez gene - 563198     See in Manteia.
RefSeq - XM_005173284
swissprot - E9QGJ5
swissprot - E7FGP0
ZFIN ID - ZDB-GENE-081107-62
Ensembl - ENSDARG00000073870
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GDPD2ENSGALG00000005842Gallus gallus
 GDPD2ENSG00000130055Homo sapiens
 Gdpd2ENSMUSG00000019359Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gdpd4b / glycerophosphodiester phosphodiesterase domain containing 4b / GDPD4* / Q3TT99* / Q6W3E5* / glycerophosphodiester phosphodiesterase domain containing 4* / Glycerophosphodiester pho...ENSDARG0000007929335
gdpd5b / glycerophosphodiester phosphodiesterase domain containing 5b / GDPD5* / Q640M6* / Q8WTR4* / glycerophosphodiester phosphodiesterase domain containing 5* / Glycerophosphodiester pho...ENSDARG0000007696234
gdpd5a / glycerophosphodiester phosphodiesterase domain containing 5a / GDPD5* / Q640M6* / Q8WTR4* / glycerophosphodiester phosphodiesterase domain containing 5* / Glycerophosphodiester pho...ENSDARG0000007728433
gdpd4a / glycerophosphodiester phosphodiesterase domain containing 4a / GDPD4* / Q6W3E5* / glycerophosphodiester phosphodiesterase domain containing 4*ENSDARG0000010244727


Protein motifs (from Interpro)
Interpro ID Name
 IPR004129  Glycerophosphoryl diester phosphodiesterase
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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