ENSDARG00000077284


Danio rerio

Features
Gene ID: ENSDARG00000077284
  
Biological name :gdpd5a
  
Synonyms : gdpd5a / glycerophosphodiester phosphodiesterase domain containing 5a
  
Possible biological names infered from orthology : GDPD5 / glycerophosphodiester phosphodiesterase domain containing 5 / Glycerophosphodiester phosphodiesterase domain-containing protein 5 / Q640M6 / Q8WTR4
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 38430359
Gene end: 38498072
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119863
Ensembl peptide - ENSDARP00000151971
Ensembl peptide - ENSDARP00000122691
Ensembl peptide - ENSDARP00000099233
NCBI entrez gene - 555247     See in Manteia.
swissprot - E9QG52
swissprot - E7FGJ8
swissprot - F1R9C0
ZFIN ID - ZDB-GENE-091204-253
Ensembl - ENSDARG00000077284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GDPD5ENSGALG00000034967Gallus gallus
 GDPD5ENSG00000158555Homo sapiens
 Gdpd5ENSMUSG00000035314Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gdpd5b / glycerophosphodiester phosphodiesterase domain containing 5b / GDPD5* / Q640M6* / Q8WTR4* / glycerophosphodiester phosphodiesterase domain containing 5* / Glycerophosphodiester pho...ENSDARG0000007696255
gdpd4b / glycerophosphodiester phosphodiesterase domain containing 4b / GDPD4* / Q3TT99* / Q6W3E5* / glycerophosphodiester phosphodiesterase domain containing 4* / Glycerophosphodiester pho...ENSDARG0000007929335
gdpd2 / glycerophosphodiester phosphodiesterase domain containing 2 / Q9ESM6* / Q9HCC8* / Mus musculus glycerophosphodiester phosphodiesterase domain containing 2 (Gdpd2), transcript varian...ENSDARG0000007387028
gdpd4a / glycerophosphodiester phosphodiesterase domain containing 4a / GDPD4* / Q6W3E5* / glycerophosphodiester phosphodiesterase domain containing 4*ENSDARG0000010244727


Protein motifs (from Interpro)
Interpro ID Name
 IPR004129  Glycerophosphoryl diester phosphodiesterase
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord decreased amount , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
Show

 ZFA:0001249 exocrine pancreas exocrine pancreas decreased amount , abnormal
Show

 ZFA:0001260 endocrine pancreas endocrine pancreas decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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