ENSDARG00000076962


Danio rerio

Features
Gene ID: ENSDARG00000076962
  
Biological name :gdpd5b
  
Synonyms : gdpd5b / glycerophosphodiester phosphodiesterase domain containing 5b
  
Possible biological names infered from orthology : GDPD5 / glycerophosphodiester phosphodiesterase domain containing 5 / Glycerophosphodiester phosphodiesterase domain-containing protein 5 / Q640M6 / Q8WTR4
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 29387910
Gene end: 29484512
  
Corresponding Affymetrix probe sets: Dr.7441.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000150028
Ensembl peptide - ENSDARP00000153640
Ensembl peptide - ENSDARP00000098433
Ensembl peptide - ENSDARP00000127839
Ensembl peptide - ENSDARP00000128142
Ensembl peptide - ENSDARP00000129846
Ensembl peptide - ENSDARP00000146700
NCBI entrez gene - 560645     See in Manteia.
swissprot - E7EY39
swissprot - X1WC96
swissprot - X1WD45
swissprot - X1WHY1
ZFIN ID - ZDB-GENE-030131-6028
Ensembl - ENSDARG00000076962
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GDPD5ENSGALG00000034967Gallus gallus
 GDPD5ENSG00000158555Homo sapiens
 Gdpd5ENSMUSG00000035314Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gdpd5a / glycerophosphodiester phosphodiesterase domain containing 5a / GDPD5* / Q640M6* / Q8WTR4* / glycerophosphodiester phosphodiesterase domain containing 5* / Glycerophosphodiester pho...ENSDARG0000007728459
gdpd4b / glycerophosphodiester phosphodiesterase domain containing 4b / GDPD4* / Q3TT99* / Q6W3E5* / glycerophosphodiester phosphodiesterase domain containing 4* / Glycerophosphodiester pho...ENSDARG0000007929339
gdpd2 / glycerophosphodiester phosphodiesterase domain containing 2 / Q9ESM6* / Q9HCC8* / Mus musculus glycerophosphodiester phosphodiesterase domain containing 2 (Gdpd2), transcript varian...ENSDARG0000007387030
gdpd4a / glycerophosphodiester phosphodiesterase domain containing 4a / GDPD4* / Q6W3E5* / glycerophosphodiester phosphodiesterase domain containing 4*ENSDARG0000010244729


Protein motifs (from Interpro)
Interpro ID Name
 IPR004129  Glycerophosphoryl diester phosphodiesterase
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000114 heart heart edematous , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
Show

 ZFA:0001115 trunk trunk curved , abnormal
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 ZFA:0001249 exocrine pancreas exocrine pancreas spatial pattern , abnormal
exocrine pancreas decreased amount , abnormal
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 ZFA:0001260 endocrine pancreas endocrine pancreas spatial pattern , abnormal
endocrine pancreas decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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