ENSDARG00000074156


Danio rerio

Features
Gene ID: ENSDARG00000074156
  
Biological name :sgca
  
Synonyms : sarcoglycan, alpha / sgca
  
Possible biological names infered from orthology : Alpha-sarcoglycan / P82350 / Q16586
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 3078221
Gene end: 3093024
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123911
Ensembl peptide - ENSDARP00000124492
NCBI entrez gene - 557170     See in Manteia.
swissprot - F8W356
swissprot - F8W4K0
ZFIN ID - ZDB-GENE-041111-121
Ensembl - ENSDARG00000074156
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGCAENSG00000108823Homo sapiens
 SgcaENSMUSG00000001508Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sgce / sarcoglycan, epsilon / O43556* / O70258* / Epsilon-sarcoglycan *ENSDARG0000001213838


Protein motifs (from Interpro)
Interpro ID Name
 IPR008908  Sarcoglycan alpha/epsilon
 IPR015919  Cadherin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003012 muscle system process IBA
 biological_processGO:0061024 membrane organization IBA
 cellular_componentGO:0016012 sarcoglycan complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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