ENSDARG00000074213


Danio rerio

Features
Gene ID: ENSDARG00000074213
  
Biological name :eif3bb
  
Synonyms : eif3bb / eukaryotic translation initiation factor 3, subunit Bb
  
Possible biological names infered from orthology : EIF3B / eukaryotic translation initiation factor 3 subunit B / P55884 / Q8JZQ9
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 11690360
Gene end: 11707665
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101986
Ensembl peptide - ENSDARP00000116987
swissprot - F1QX66
swissprot - F1RA36
ZFIN ID - ZDB-GENE-090312-175
Ensembl - ENSDARG00000074213
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EIF3BENSGALG00000040999Gallus gallus
 EIF3BENSG00000106263Homo sapiens
 Eif3bENSMUSG00000056076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eif3ba / eukaryotic translation initiation factor 3, subunit Ba / EIF3B* / Q8JZQ9* / P55884* / eukaryotic translation initiation factor 3 subunit B*ENSDARG0000005965488


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR011400  Eukaryotic translation initiation factor 3 subunit B
 IPR013979  Translation initiation factor, beta propellor-like domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR034363  eIF3B, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001732 formation of cytoplasmic translation initiation complex IEA
 biological_processGO:0002183 cytoplasmic translational initiation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IEA
 cellular_componentGO:0016282 eukaryotic 43S preinitiation complex IEA
 cellular_componentGO:0033290 eukaryotic 48S preinitiation complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA
 molecular_functionGO:0031369 translation initiation factor binding IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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