ENSDARG00000074663


Danio rerio

Features
Gene ID: ENSDARG00000074663
  
Biological name :SAMD8
  
Synonyms : SAMD8 / zgc:162183
  
Possible biological names infered from orthology : Q96LT4 / Q9DA37 / sterile alpha motif domain containing 8
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 20569806
Gene end: 20590238
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000156794
Ensembl peptide - ENSDARP00000102971
NCBI entrez gene - 100037314     See in Manteia.
RefSeq - NM_001089470
RefSeq Peptide - NP_001082939
swissprot - A4QNV5
ZFIN ID - ZDB-GENE-070410-30
Ensembl - ENSDARG00000074663
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMD8ENSGALG00000005004Gallus gallus
 SAMD8ENSG00000156671Homo sapiens
 Samd8ENSMUSG00000021770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:91976 / SGMS1* / Q8VCQ6* / sphingomyelin synthase 1* / Phosphatidylcholine:ceramide cholinephosphotransferase 1 *ENSDARG0000005705335
sgms1 / sphingomyelin synthase 1 / Q8VCQ6* / Phosphatidylcholine:ceramide cholinephosphotransferase 1 *ENSDARG0000002962134
sgms2 / sphingomyelin synthase 2ENSDARG0000005252030
zgc:100911ENSDARG0000003689729


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR025749  Sphingomyelin synthase-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046513 ceramide biosynthetic process IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IBA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0033188 sphingomyelin synthase activity IBA
 molecular_functionGO:0047493 ceramide cholinephosphotransferase activity IBA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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