ENSDARG00000074756


Danio rerio

Features
Gene ID: ENSDARG00000074756
  
Biological name :tfb2m
  
Synonyms : tfb2m / transcription factor B2, mitochondrial
  
Possible biological names infered from orthology : Q3TL26 / Q9H5Q4
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 12058509
Gene end: 12073355
  
Corresponding Affymetrix probe sets: Dr.17195.1.A1_x_at (Zebrafish Array)   Dr.17195.2.A1_x_at (Zebrafish Array)   Dr.24670.1.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123820
NCBI entrez gene - 569468     See in Manteia.
RefSeq - NM_001113617
RefSeq Peptide - NP_001107089
swissprot - B7ZVD7
ZFIN ID - ZDB-GENE-070521-3
Ensembl - ENSDARG00000074756
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000010651Gallus gallus
 TFB2MENSG00000162851Homo sapiens
 Tfb2mENSMUSG00000026492Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001737  Ribosomal RNA adenine methyltransferase KsgA/Erm
 IPR016861  Mitochondrial transcription factor TFB2
 IPR020598  Ribosomal RNA adenine methylase transferase, N-terminal
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006390 mitochondrial transcription IBA
 biological_processGO:0006391 transcription initiation from mitochondrial promoter IEA
 biological_processGO:0031167 rRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IBA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008649 rRNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Mitochondrial transcription initiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000101220 polrmt / polymerase (RNA) mitochondrial (DNA directed) / O00411* / Q8BKF1* / RNA polymerase mitochondrial*  / complex






 

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