ENSDARG00000074842


Danio rerio

Features
Gene ID: ENSDARG00000074842
  
Biological name :snx8a
  
Synonyms : snx8a / sorting nexin 8a
  
Possible biological names infered from orthology : Q8CFD4 / Q9Y5X2 / SNX8 / sorting nexin 8
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 42090418
Gene end: 42120172
  
Corresponding Affymetrix probe sets: Dr.11993.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103840
Ensembl peptide - ENSDARP00000128334
NCBI entrez gene - 555448     See in Manteia.
RefSeq - NM_001326490
RefSeq Peptide - NP_001313419
swissprot - F6NGW9
swissprot - X1WDN5
ZFIN ID - ZDB-GENE-031202-1
Ensembl - ENSDARG00000074842
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX8ENSGALG00000004255Gallus gallus
 SNX8ENSG00000106266Homo sapiens
 Snx8ENSMUSG00000029560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx8b / sorting nexin 8b / SNX8* / Q9Y5X2* / Q8CFD4* / sorting nexin 8*ENSDARG0000007805743


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR011992  EF-hand domain pair
 IPR028662  Sorting nexin-8/Mvp1
 IPR035704  SNX8/Mvp1, PX domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0016050 vesicle organization IBA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr