ENSDARG00000078057


Danio rerio

Features
Gene ID: ENSDARG00000078057
  
Biological name :snx8b
  
Synonyms : snx8b / sorting nexin 8b
  
Possible biological names infered from orthology : Q8CFD4 / Q9Y5X2 / SNX8 / sorting nexin 8
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 11881559
Gene end: 11900420
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000154632
Ensembl peptide - ENSDARP00000131173
NCBI entrez gene - 799225     See in Manteia.
RefSeq - XM_009306530
RefSeq - XM_021475993
swissprot - A0A0R4IDN5
ZFIN ID - ZDB-GENE-090313-317
Ensembl - ENSDARG00000078057
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX8ENSGALG00000004255Gallus gallus
 SNX8ENSG00000106266Homo sapiens
 Snx8ENSMUSG00000029560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx8a / sorting nexin 8a / SNX8* / Q9Y5X2* / Q8CFD4* / sorting nexin 8*ENSDARG0000007484254


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR028662  Sorting nexin-8/Mvp1
 IPR035704  SNX8/Mvp1, PX domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr