ENSMUSG00000029560


Mus musculus

Features
Gene ID: ENSMUSG00000029560
  
Biological name :Snx8
  
Synonyms : Q8CFD4 / Snx8 / sorting nexin 8
  
Possible biological names infered from orthology : Q9Y5X2
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G2
Gene start: 140340299
Gene end: 140389262
  
Corresponding Affymetrix probe sets: 10535213 (MoGene1.0st)   1454667_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142394
Ensembl peptide - ENSMUSP00000142866
Ensembl peptide - ENSMUSP00000142556
Ensembl peptide - ENSMUSP00000142491
Ensembl peptide - ENSMUSP00000031539
Ensembl peptide - ENSMUSP00000142390
NCBI entrez gene - 231834     See in Manteia.
MGI - MGI:2443816
RefSeq - NM_172277
RefSeq - XM_006504673
RefSeq - XM_006504672
RefSeq Peptide - NP_758481
swissprot - A0A0G2JEQ9
swissprot - Q3U0I9
swissprot - Q8CFD4
swissprot - A0A0G2JDJ6
swissprot - A0A0G2JDT3
Ensembl - ENSMUSG00000029560
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx8aENSDARG00000074842Danio rerio
 snx8bENSDARG00000078057Danio rerio
 SNX8ENSGALG00000004255Gallus gallus
 SNX8ENSG00000106266Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR027267  AH/BAR domain superfamily
 IPR028662  Sorting nexin-8/Mvp1
 IPR035704  SNX8/Mvp1, PX domain
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016050 vesicle organization IBA
 biological_processGO:0034498 early endosome to Golgi transport IEA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0030904 retromer complex IEA
 cellular_componentGO:0031901 early endosome membrane ISS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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