ENSDARG00000075132


Danio rerio

Features
Gene ID: ENSDARG00000075132
  
Biological name :fh
  
Synonyms : fh / fumarate hydratase
  
Possible biological names infered from orthology : Fh1 / Fumarate hydratase, mitochondrial / P07954 / P97807
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 47638430
Gene end: 47648538
  
Corresponding Affymetrix probe sets: Dr.14262.1.A1_a_at (Zebrafish Array)   NM_200963_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000097494
NCBI entrez gene - 393938     See in Manteia.
RefSeq - NM_200963
RefSeq Peptide - NP_957257
swissprot - F1QWR4
ZFIN ID - ZDB-GENE-010724-6
Ensembl - ENSDARG00000075132
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FHENSGALG00000013165Gallus gallus
 FHENSG00000091483Homo sapiens
 Fh1ENSMUSG00000026526Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000362  Fumarate lyase family
 IPR005677  Fumarate hydratase, class II
 IPR008948  L-Aspartase-like
 IPR018951  Fumarase C, C-terminal
 IPR020557  Fumarate lyase, conserved site
 IPR022761  Fumarate lyase, N-terminal
 IPR024083  Fumarase/histidase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006099 tricarboxylic acid cycle IEA
 biological_processGO:0006106 fumarate metabolic process IEA
 cellular_componentGO:0045239 tricarboxylic acid cycle enzyme complex IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004333 fumarate hydratase activity IEA
 molecular_functionGO:0016829 lyase activity IEA


Pathways (from Reactome)
Pathway description
Citric acid cycle (TCA cycle)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism morphology , abnormal
whole organism dead , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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