ENSDARG00000075347


Danio rerio

Features
Gene ID: ENSDARG00000075347
  
Biological name :chfr
  
Synonyms : A5WW08 / checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase / chfr
  
Possible biological names infered from orthology : checkpoint with forkhead and ring finger domains / E3 ubiquitin-protein ligase CHFR / Q810L3 / Q96EP1
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 17780475
Gene end: 17813299
  
Corresponding Affymetrix probe sets: Dr.26409.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000099431
Ensembl peptide - ENSDARP00000098332
NCBI entrez gene - 564271     See in Manteia.
RefSeq - XM_017356138
RefSeq - XM_017356139
RefSeq - NM_001100015
RefSeq - XM_021476266
RefSeq Peptide - NP_001093485
swissprot - A5WW08
ZFIN ID - ZDB-GENE-030131-3522
Ensembl - ENSDARG00000075347
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHFRENSGALG00000002180Gallus gallus
 CHFRENSG00000072609Homo sapiens
 ChfrENSMUSG00000014668Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR001841  Zinc finger, RING-type
 IPR008984  SMAD/FHA domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination ISS
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007093 mitotic cell cycle checkpoint IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0019941 modification-dependent protein catabolic process ISS
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0016605 PML body ISS
 molecular_functionGO:0000166 nucleotide binding ISS
 molecular_functionGO:0004842 ubiquitin-protein transferase activity ISS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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