ENSDARG00000075461


Danio rerio

Features
Gene ID: ENSDARG00000075461
  
Biological name :kmt5c
  
Synonyms : kmt5c / lysine methyltransferase 5C
  
Possible biological names infered from orthology : Mus musculus lysine methyltransferase 5C (Kmt5c), transcript variant 3, mRNA. / Q6Q783 / Q86Y97
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 30868326
Gene end: 30888415
  
Corresponding Affymetrix probe sets: Dr.17312.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000106462
Ensembl peptide - ENSDARP00000101860
NCBI entrez gene - 569041     See in Manteia.
RefSeq - NM_001098186
RefSeq Peptide - NP_001091656
swissprot - F1QBA2
swissprot - F1Q9U2
ZFIN ID - ZDB-GENE-080523-2
Ensembl - ENSDARG00000075461
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KMT5CENSG00000133247Homo sapiens
 Kmt5cENSMUSG00000059851Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kmt5b / Q5U3H2 / lysine methyltransferase 5B / Q3U8K7* / Q4FZB7* / Histone-lysine N-methyltransferase KMT5B *ENSDARG0000004108127


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR025790  Histone-lysine N-methyltransferase, Suvar4-20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032259 methylation IEA
 biological_processGO:0034770 histone H4-K20 methylation IGI
 biological_processGO:0034773 histone H4-K20 trimethylation IEA
 biological_processGO:0040014 regulation of multicellular organism growth IGI
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity IEA
 molecular_functionGO:0042799 histone methyltransferase activity (H4-K20 specific) IEA


Pathways (from Reactome)
Pathway description
PKMTs methylate histone lysines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism dwarf-like , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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