ENSDARG00000075752


Danio rerio

Features
Gene ID: ENSDARG00000075752
  
Biological name :myo18aa
  
Synonyms : myo18aa / myosin XVIIIAa
  
Possible biological names infered from orthology : MYO18A / myosin XVIIIA / Q92614 / Q9JMH9
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 36950773
Gene end: 37075361
  
Corresponding Affymetrix probe sets: Dr.19639.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000097848
Ensembl peptide - ENSDARP00000118849
NCBI entrez gene - 566880     See in Manteia.
RefSeq - XM_690164
swissprot - E7F632
swissprot - A0A0R4J7R2
ZFIN ID - ZDB-GENE-080425-5
Ensembl - ENSDARG00000075752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO18AENSGALG00000003741Gallus gallus
 MYO18AENSG00000196535Homo sapiens
 Myo18aENSMUSG00000000631Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo18ab / myosin XVIIIAb / Q9JMH9* / MYO18A* / Q92614* / myosin XVIIIA*ENSDARG0000006186265
myhc4 / myosin heavy chain 4ENSDARG0000003543817
myhz1.1 / myosin, heavy polypeptide 1.1, skeletal muscleENSDARG0000006799017
myhz1.2 / myosin, heavy polypeptide 1.2, skeletal muscleENSDARG0000006799516
myha / myosin, heavy chain aENSDARG0000009593016
zgc:66156ENSDARG000000952176
CABZ01102039.1ENSDARG000000763573
CABZ01079178.1ENSDARG000001113862
CU633479.6ENSDARG000001148181


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001478  PDZ domain
 IPR001609  Myosin head, motor domain
 IPR002928  Myosin tail
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031244  Unconventional myosin-XVIIIa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0007030 Golgi organization IGI
 biological_processGO:0007160 cell-matrix adhesion IGI
 biological_processGO:0014866 skeletal myofibril assembly IMP
 biological_processGO:0048741 skeletal muscle fiber development IMP
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000155 somite somite patchy , abnormal
Show

 ZFA:0001056 myotome myotome anatomical boundary spatial pattern , abnormal
Show

 ZFA:0001094 whole organism whole organism anterior-posterior axis shortened , abnormal
whole organism anterior-posterior axis bent , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk bent , abnormal
Show

 ZFA:0001462 somite border somite border spatial pattern , abnormal
somite border irregular spatial pattern , abnormal
Show

 ZFA:0009025 myoblast myoblast Golgi apparatus morphology , abnormal
myoblast cell-matrix adhesion arrested , abnormal
myoblast cell-matrix adhesion decreased occurrence , abnormal
Show

 ZFA:0009114 muscle cell muscle cell disorganized , abnormal
muscle cell detached from myotome , abnormal
muscle cell misaligned with somite , abnormal
muscle cell detached from somite border , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr