ENSDARG00000076176


Danio rerio

Features
Gene ID: ENSDARG00000076176
  
Biological name :ptcd1
  
Synonyms : pentatricopeptide repeat domain 1 / ptcd1
  
Possible biological names infered from orthology : ATP5MF-PTCD1 / ATP5MF-PTCD1 readthrough / O75127 / Pentatricopeptide repeat-containing protein 1, mitochondrial / Q8C2E4
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 8555323
Gene end: 8566567
  
Corresponding Affymetrix probe sets: Dr.9394.1.A1_at (Zebrafish Array)   Dr.9394.2.S1_at (Zebrafish Array)   XM_693706_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000104026
NCBI entrez gene - 570247     See in Manteia.
RefSeq - XM_021471105
RefSeq - XM_693706
swissprot - E7F3M0
ZFIN ID - ZDB-GENE-030131-6146
Ensembl - ENSDARG00000076176
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000004711Gallus gallus
 ATP5MF-PTCD1ENSG00000248919Homo sapiens
 PTCD1ENSG00000106246Homo sapiens
 Ptcd1ENSMUSG00000029624Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr