ENSDARG00000076379


Danio rerio

Features
Gene ID: ENSDARG00000076379
  
Biological name :nsmce2
  
Synonyms : NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase / nsmce2
  
Possible biological names infered from orthology : E3 SUMO-protein ligase NSE2 / Q91VT1 / Q96MF7
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 25664078
Gene end: 25672591
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129789
Ensembl peptide - ENSDARP00000152080
NCBI entrez gene - 564644     See in Manteia.
swissprot - B3DIX8
ZFIN ID - ZDB-GENE-081022-128
Ensembl - ENSDARG00000076379
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NSMCE2ENSGALG00000043439Gallus gallus
 NSMCE2ENSG00000156831Homo sapiens
 Nsmce2ENSMUSG00000059586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004181  Zinc finger, MIZ-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR026846  E3 SUMO-protein ligase Nse2 (Mms21)


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0016925 protein sumoylation IEA
 cellular_componentGO:0030915 Smc5-Smc6 complex IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019789 SUMO transferase activity IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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