ENSG00000156831


Homo sapiens

Features
Gene ID: ENSG00000156831
  
Biological name :NSMCE2
  
Synonyms : NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase / NSMCE2 / Q96MF7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q24.13
Gene start: 125091679
Gene end: 125367120
  
Corresponding Affymetrix probe sets: 226536_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000428846
Ensembl peptide - ENSP00000481615
Ensembl peptide - ENSP00000478256
Ensembl peptide - ENSP00000431002
Ensembl peptide - ENSP00000430668
Ensembl peptide - ENSP00000430313
Ensembl peptide - ENSP00000429612
Ensembl peptide - ENSP00000429383
Ensembl peptide - ENSP00000429014
Ensembl peptide - ENSP00000287437
NCBI entrez gene - 286053     See in Manteia.
OMIM - 617246
RefSeq - XM_017013333
RefSeq - XM_017013331
RefSeq - XM_017013330
RefSeq - XM_011516975
RefSeq - XM_011516974
RefSeq - XM_005250876
RefSeq - XM_005250875
RefSeq - NM_173685
RefSeq - NM_001349485
RefSeq Peptide - NP_001336414
RefSeq Peptide - NP_001336415
RefSeq Peptide - NP_775956
swissprot - E5RIM1
swissprot - Q96MF7
swissprot - H0YB96
swissprot - A0A024R9J6
swissprot - A0A087WTZ8
swissprot - E5RFJ1
swissprot - E5RG00
swissprot - E5RK09
swissprot - E5RHW9
Ensembl - ENSG00000156831
  
Related genetic diseases (OMIM): 617253 - Seckel syndrome 10, 617253
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nsmce2ENSDARG00000076379Danio rerio
 NSMCE2ENSGALG00000043439Gallus gallus
 Nsmce2ENSMUSG00000059586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004181  Zinc finger, MIZ-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR026846  E3 SUMO-protein ligase Nse2 (Mms21)


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000722 telomere maintenance via recombination IMP
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0016925 protein sumoylation IEA
 biological_processGO:0034184 positive regulation of maintenance of mitotic sister chromatid cohesion IMP
 biological_processGO:0045842 positive regulation of mitotic metaphase/anaphase transition IMP
 biological_processGO:0051301 cell division IEA
 biological_processGO:0090398 cellular senescence IMP
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0016605 PML body IEA
 cellular_componentGO:0030915 Smc5-Smc6 complex IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019789 SUMO transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000308 Microretrognathia 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000541 Detached retina 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000831 Insulin-resistant diabetes mellitus 
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 HP:0000833 Glucose intolerance 
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 HP:0000956 Acanthosis nigricans 
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 HP:0001397 Hepatic steatosis 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001714 Ventricular hypertrophy 
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 HP:0001735 Pancreatitis, acute 
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 HP:0002155 Hypertriglyceridemia 
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 HP:0003016 Metaphyseal widening "Abnormal widening of the metaphyseal regions of long bones." [HPO:curators]
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 HP:0003076 Glycosuria "The excretion of abnormal amounts of glucose in the urine, generally resulting in osmotic diuresis." [HPO:curators]
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 HP:0003100 Thin long bones 
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 HP:0005112 Dilatation of the abdominal aorta 
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 HP:0007875 Congenital blindness 
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 HP:0008193 Primary gonadal insufficiency 
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 HP:0008232 Elevated follicle stimulating hormone 
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 HP:0008890 Severe short-limb dwarfism 
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 HP:0010579 Cone-shaped epiphyses 
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 HP:0010609 Skin tags 
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 HP:0010620 Prominent malar region "Increased prominence of the malar region (cheeks)." [HPO:curators]
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 HP:0011969 Elevated luteinizing hormone "An elevated concentration of luteinizing hormone in the blood." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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