ENSDARG00000076472


Danio rerio

Features
Gene ID: ENSDARG00000076472
  
Biological name :ovol1a
  
Synonyms : ovol1a / ovo-like zinc finger 1a
  
Possible biological names infered from orthology : O14753 / OVOL1 / ovo like transcriptional repressor 1 / Putative transcription factor Ovo-like 1 / Q9WTJ2
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 19835569
Gene end: 19848037
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124196
NCBI entrez gene - 792456     See in Manteia.
RefSeq - NM_001114744
RefSeq - XM_021477614
RefSeq Peptide - NP_001108216
swissprot - F8W4G4
ZFIN ID - ZDB-GENE-031010-37
Ensembl - ENSDARG00000076472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OVOL1ENSG00000172818Homo sapiens
 Ovol1ENSMUSG00000024922Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ovol1b / ovo-like zinc finger 1b / OVOL1* / Q9WTJ2* / O14753* / ovo like transcriptional repressor 1* / Putative transcription factor Ovo-like 1 *ENSDARG0000007825643
zbtb49 / zinc finger and BTB domain containing 49 / Q6ZSB9*ENSDARG0000010211118
mynn / myoneurin / Q99MD8* / Q9NPC7*ENSDARG0000000727117
OVOL3 / zgc:171929 / O00110* / ovo like zinc finger 3*ENSDARG0000010019717


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IMP
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0070285 pigment cell development IMP
 biological_processGO:0090150 establishment of protein localization to membrane IMP
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000092 axis axis xanthoblast mislocalised medially , abnormal
axis melanoblast mislocalised medially , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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