ENSG00000172818


Homo sapiens

Features
Gene ID: ENSG00000172818
  
Biological name :OVOL1
  
Synonyms : O14753 / OVOL1 / ovo like transcriptional repressor 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.1
Gene start: 65787022
Gene end: 65797219
  
Corresponding Affymetrix probe sets: 206604_at (Human Genome U133 Plus 2.0 Array)   229396_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000337862
Ensembl peptide - ENSP00000434220
NCBI entrez gene - 5017     See in Manteia.
OMIM - 602313
RefSeq - XM_017017838
RefSeq - NM_004561
RefSeq - XM_011545067
RefSeq - XM_011545068
RefSeq - XM_017017837
RefSeq - XM_005274018
RefSeq Peptide - NP_004552
swissprot - O14753
swissprot - G3V1B0
Ensembl - ENSG00000172818
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ovol1aENSDARG00000076472Danio rerio
 ovol1bENSDARG00000078256Danio rerio
 Ovol1ENSMUSG00000024922Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OVOL2 / Q9BRP0 / ovo like zinc finger 2ENSG0000012585052
OVOL3 / O00110 / ovo like zinc finger 3ENSG0000010526136
Q6ZSB9 / ZBTB49 / zinc finger and BTB domain containing 49ENSG0000016882624
MYNN / Q9NPC7 / myoneurinENSG0000008527422


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR027756  Ovo-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007498 mesoderm development IEA
 biological_processGO:0008544 epidermis development IEA
 biological_processGO:0043588 skin development IEA
 biological_processGO:0051729 germline cell cycle switching, mitotic to meiotic cell cycle IEA
 biological_processGO:1901994 negative regulation of meiotic cell cycle phase transition IEA
 biological_processGO:2000647 negative regulation of stem cell proliferation IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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