ENSDARG00000076584


Danio rerio

Features
Gene ID: ENSDARG00000076584
  
Biological name :patz1
  
Synonyms : patz1 / POZ (BTB) and AT hook containing zinc finger 1
  
Possible biological names infered from orthology : POZ-, AT hook-, and zinc finger-containing protein 1 isoform 3 / Q9HBE1
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 40951227
Gene end: 40968320
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129407
Ensembl peptide - ENSDARP00000155487
NCBI entrez gene - 560290     See in Manteia.
RefSeq - XM_009302608
swissprot - X1WGP9
ZFIN ID - ZDB-GENE-111223-4
Ensembl - ENSDARG00000076584
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PATZ1ENSGALG00000006934Gallus gallus
 PATZ1ENSG00000100105Homo sapiens
 Patz1ENSMUSG00000020453Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-166g5.4ENSDARG0000006355521
vezf1a / vascular endothelial zinc finger 1a / VEZF1* / Q14119* / vascular endothelial zinc finger 1*ENSDARG0000000824721
maza / MYC-associated zinc finger protein a (purine-binding transcription factor)ENSDARG0000008733020
vezf1b / vascular endothelial zinc finger 1b / VEZF1* / Q14119* / vascular endothelial zinc finger 1*ENSDARG0000006103020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr