ENSDARG00000076815


Danio rerio

Features
Gene ID: ENSDARG00000076815
  
Biological name :eif3s10
  
Synonyms : eif3s10 / eukaryotic translation initiation factor 3, subunit 10 (theta) / Q6PCR7
  
Possible biological names infered from orthology : EIF3A / eukaryotic translation initiation factor 3 subunit A / P23116 / Q14152
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 19283936
Gene end: 19317569
  
Corresponding Affymetrix probe sets: Dr.25592.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000102398
NCBI entrez gene - 327515     See in Manteia.
RefSeq - XM_005156611
RefSeq - NM_199820
RefSeq Peptide - NP_956114
swissprot - Q6PCR7
ZFIN ID - ZDB-GENE-030131-5726
Ensembl - ENSDARG00000076815
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000009328Gallus gallus
 ENSGALG00000041242Gallus gallus
 EIF3AENSG00000107581Homo sapiens
 Eif3aENSMUSG00000024991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR027512  Eukaryotic translation initiation factor 3 subunit A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001732 formation of cytoplasmic translation initiation complex IBA
 biological_processGO:0002188 translation reinitiation IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex ISS
 cellular_componentGO:0043614 multi-eIF complex IBA
 cellular_componentGO:0071540 eukaryotic translation initiation factor 3 complex, eIF3e IBA
 cellular_componentGO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0003743 translation initiation factor activity IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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