ENSDARG00000077264


Danio rerio

Features
Gene ID: ENSDARG00000077264
  
Biological name :wdr43
  
Synonyms : wdr43 / WD repeat domain 43
  
Possible biological names infered from orthology : Q15061 / Q6ZQL4
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 24821627
Gene end: 24835683
  
Corresponding Affymetrix probe sets: Dr.3743.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124457
NCBI entrez gene - 317637     See in Manteia.
RefSeq - NM_001018166
RefSeq Peptide - NP_001018176
swissprot - A9JR96
ZFIN ID - ZDB-GENE-021231-3
Ensembl - ENSDARG00000077264
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR43ENSGALG00000032529Gallus gallus
 WDR43ENSG00000163811Homo sapiens
 Wdr43ENSMUSG00000041057Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR007148  Small-subunit processome, Utp12
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IMP
 biological_processGO:0001570 vasculogenesis IMP
 biological_processGO:0042254 ribosome biogenesis IMP
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IMP
 biological_processGO:0060218 hematopoietic stem cell differentiation IMP


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000014 dorsal aorta dorsal aorta morphology , abnormal
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 ZFA:0000045 neural crest neural crest poorly differentiated , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
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 ZFA:0000107 eye eye morphology , abnormal
eye decreased size , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle hydrocephalic , abnormal
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 ZFA:0000152 retina retina neuroectoderm necrotic , abnormal
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 ZFA:0001077 thymus primordium thymus primordium common lymphoid progenitor absent , abnormal
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 ZFA:0001094 whole organism whole organism viability , abnormal
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 ZFA:0001114 head head lacks parts or has fewer parts of type pharyngeal arch cartilage , abnormal
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 ZFA:0001115 trunk trunk necrotic , abnormal
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 ZFA:0001135 neural tube neural tube necrotic , abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel aplastic , abnormal
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 ZFA:0001306 pharyngeal arch pharyngeal arch necrotic , abnormal
pharyngeal arch morphology , abnormal
pharyngeal arch physical object quality , abnormal
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 ZFA:0005028 ventral wall of dorsal aorta ventral wall of dorsal aorta hematopoietic stem cell absent , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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